Unclear What this check controls is not stated, so it is unclear which of your user settings now behave differently.
What
Claude Code has a check that it applies to settings depending on where they come from. That check already skipped a fixed list of sources. It now also skips user settings, which are the settings you set for yourself across all your projects.
Why
Whatever this check controls no longer applies to values that come from your user settings.
Something disagreesSomething we can check disagrees with this entry, or the writer said they could not settle it.
The writer flagged doubt
What this check controls is not stated, so it is unclear which of your user settings now behave differently.